Targeted transgene integration overcomes variability of position effects in zebrafish.
Authors
Roberts, Jennifer AnneMiguel-Escalada, Irene
Slovik, Katherine Joan
Walsh, Kathleen Theodora
Hadzhiev, Yavor
Sanges, Remo
Stupka, Elia
Marsh, Elizabeth Kate
Balciuniene, Jorune
Balciunas, Darius
Müller, Ferenc
Issue Date
2014-01-21
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Zebrafish transgenesis is increasingly popular owing to the optical transparency and external development of embryos, which provide a scalable vertebrate model for in vivo experimentation. The ability to express transgenes in a tightly controlled spatio-temporal pattern is an important prerequisite for exploitation of zebrafish in a wide range of biomedical applications. However, conventional transgenesis methods are plagued by position effects: the regulatory environment of genomic integration sites leads to variation of expression patterns of transgenes driven by engineered cis-regulatory modules. This limitation represents a bottleneck when studying the precise function of cis-regulatory modules and their subtle variants or when various effector proteins are to be expressed for labelling and manipulation of defined sets of cells. Here, we provide evidence for the efficient elimination of variability of position effects by developing a PhiC31 integrase-based targeting method. To detect targeted integration events, a simple phenotype scoring of colour change in the lens of larvae is used. We compared PhiC31-based integration and Tol2 transgenesis in the analysis of the activity of a novel conserved enhancer from the developmentally regulated neural-specific esrrga gene. Reporter expression was highly variable among independent lines generated with Tol2, whereas all lines generated with PhiC31 into a single integration site displayed nearly identical, enhancer-specific reporter expression in brain nuclei. Moreover, we demonstrate that a modified integrase system can also be used for the detection of enhancer activity in transient transgenesis. These results demonstrate the power of the PhiC31-based transgene integration for the annotation and fine analysis of transcriptional regulatory elements and it promises to be a generally desirable tool for a range of applications, which rely on highly reproducible patterns of transgene activity in zebrafish.Citation
Roberts, J.A. et al. (2014) 'Targeted transgene integration overcomes variability of position effects in zebrafish', Development, 141(3), pp.715-724. doi: 10.1242/dev.100347.Journal
DevelopmentDOI
10.1242/dev.100347PubMed ID
24449846Additional Links
https://www.ncbi.nlm.nih.gov/pubmed/24449846https://dev.biologists.org/content/141/3/715
Type
ArticleLanguage
enISSN
1477-9129ae974a485f413a2113503eed53cd6c53
10.1242/dev.100347
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- Creative Commons
Except where otherwise noted, this item's license is described as Attribution-NonCommercial-NoDerivs 3.0 United States
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